Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 GPX1P2-201ENST00000429271 606 ntBASIC17.59■□□□□ 0.41
TSPAN3O60637 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 AC092183.1-201ENST00000469884 875 ntBASIC17.59■□□□□ 0.41
TSPAN3O60637 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 MIR3687-2-201ENST00000577708 61 ntBASIC17.59■□□□□ 0.41
TSPAN3O60637 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TSPAN3O60637 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 MIR3687-1-201ENST00000614492 61 ntBASIC17.59■□□□□ 0.41
TSPAN3O60637 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.59■□□□□ 0.41
TSPAN3O60637 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.59■□□□□ 0.41
TSPAN3O60637 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TSPAN3O60637 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TSPAN3O60637 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN3O60637 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.58■□□□□ 0.41
TSPAN3O60637 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TSPAN3O60637 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.58■□□□□ 0.4
TSPAN3O60637 FAM185BP-201ENST00000443595 716 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 DNAJB3-201ENST00000446806 729 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.58■□□□□ 0.4
TSPAN3O60637 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.58■□□□□ 0.4
TSPAN3O60637 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.58■□□□□ 0.4
TSPAN3O60637 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 KRT19P2-202ENST00000557173 1012 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.58■□□□□ 0.4
TSPAN3O60637 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.58■□□□□ 0.4
TSPAN3O60637 MTDHP5-201ENST00000598980 586 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 AC141586.5-201ENST00000624546 2050 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN3O60637 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.58■□□□□ 0.4
TSPAN3O60637 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.58■□□□□ 0.4
TSPAN3O60637 AC116353.5-201ENST00000638148 1699 ntBASIC17.58■□□□□ 0.4
TSPAN3O60637 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TSPAN3O60637 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TSPAN3O60637 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TSPAN3O60637 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN3O60637 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TSPAN3O60637 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN3O60637 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 RHOQP3-201ENST00000437982 621 ntBASIC17.57■□□□□ 0.4
TSPAN3O60637 AL513480.1-201ENST00000451731 511 ntBASIC17.57■□□□□ 0.4
TSPAN3O60637 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.57■□□□□ 0.4
TSPAN3O60637 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.57■□□□□ 0.4
TSPAN3O60637 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN3O60637 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.57■□□□□ 0.4
TSPAN3O60637 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
TSPAN3O60637 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.57■□□□□ 0.4
TSPAN3O60637 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.57■□□□□ 0.4
TSPAN3O60637 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSPAN3O60637 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TSPAN3O60637 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms