Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 AL021920.2-201ENST00000624828 1351 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXS1O43638 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.01■□□□□ 0.15
FOXS1O43638 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXS1O43638 AC074386.1-202ENST00000463561 864 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXS1O43638 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXS1O43638 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 MTDHP5-201ENST00000598980 586 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXS1O43638 AC080080.1-201ENST00000625121 2420 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 SLC22A20-204ENST00000530038 1673 ntBASIC16.01■□□□□ 0.15
FOXS1O43638 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXS1O43638 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXS1O43638 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXS1O43638 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXS1O43638 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 AL353732.1-201ENST00000569618 1459 ntBASIC16■□□□□ 0.15
FOXS1O43638 RPSAP43-201ENST00000402237 625 ntBASIC16■□□□□ 0.15
FOXS1O43638 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16■□□□□ 0.15
FOXS1O43638 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 AC112482.1-201ENST00000492080 688 ntBASIC16■□□□□ 0.15
FOXS1O43638 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16■□□□□ 0.15
FOXS1O43638 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16■□□□□ 0.15
FOXS1O43638 MIR4515-201ENST00000584082 81 ntBASIC16■□□□□ 0.15
FOXS1O43638 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 MED16-214ENST00000617672 554 ntTSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXS1O43638 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16■□□□□ 0.15
FOXS1O43638 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXS1O43638 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXS1O43638 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXS1O43638 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXS1O43638 UPF3AP3-201ENST00000420996 769 ntBASIC15.99■□□□□ 0.15
FOXS1O43638 GPX1P2-201ENST00000429271 606 ntBASIC15.99■□□□□ 0.15
FOXS1O43638 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXS1O43638 DNAJB3-201ENST00000446806 729 ntBASIC15.99■□□□□ 0.15
FOXS1O43638 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXS1O43638 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXS1O43638 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXS1O43638 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXS1O43638 AC091167.2-201ENST00000579581 588 ntBASIC15.99■□□□□ 0.15
FOXS1O43638 MPDU1-223ENST00000582151 728 ntBASIC15.99■□□□□ 0.15
FOXS1O43638 AC010327.4-202ENST00000591484 748 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms