Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RN7SL818P-201ENST00000485099 259 ntBASIC18.22■□□□□ 0.51
TNRC18O15417 RN7SL725P-201ENST00000606439 259 ntBASIC18.22■□□□□ 0.51
TNRC18O15417 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TNRC18O15417 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
TNRC18O15417 AL353732.1-201ENST00000569618 1459 ntBASIC18.22■□□□□ 0.51
TNRC18O15417 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNRC18O15417 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 AC020914.3-201ENST00000594712 304 ntBASIC18.21■□□□□ 0.51
TNRC18O15417 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.21■□□□□ 0.51
TNRC18O15417 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.21■□□□□ 0.51
TNRC18O15417 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNRC18O15417 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNRC18O15417 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNRC18O15417 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNRC18O15417 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.21■□□□□ 0.51
TNRC18O15417 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.21■□□□□ 0.5
TNRC18O15417 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.21■□□□□ 0.5
TNRC18O15417 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.21■□□□□ 0.5
TNRC18O15417 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TNRC18O15417 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TNRC18O15417 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.2■□□□□ 0.5
TNRC18O15417 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.2■□□□□ 0.5
TNRC18O15417 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.2■□□□□ 0.5
TNRC18O15417 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
TNRC18O15417 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TNRC18O15417 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.2■□□□□ 0.5
TNRC18O15417 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TNRC18O15417 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 AL591846.1-201ENST00000451736 433 ntBASIC18.2■□□□□ 0.5
TNRC18O15417 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.2■□□□□ 0.5
TNRC18O15417 AC002558.1-201ENST00000488906 803 ntBASIC18.2■□□□□ 0.5
TNRC18O15417 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TNRC18O15417 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.2■□□□□ 0.5
TNRC18O15417 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNRC18O15417 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TNRC18O15417 AC069218.1-201ENST00000435269 762 ntBASIC18.19■□□□□ 0.5
TNRC18O15417 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
TNRC18O15417 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.19■□□□□ 0.5
TNRC18O15417 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.19■□□□□ 0.5
TNRC18O15417 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.19■□□□□ 0.5
TNRC18O15417 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.19■□□□□ 0.5
TNRC18O15417 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TNRC18O15417 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.19■□□□□ 0.5
TNRC18O15417 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TNRC18O15417 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.19■□□□□ 0.5
TNRC18O15417 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.19■□□□□ 0.5
TNRC18O15417 TDH-203ENST00000531764 1110 ntBASIC18.19■□□□□ 0.5
TNRC18O15417 IQSEC3P1-201ENST00000538799 536 ntBASIC18.19■□□□□ 0.5
TNRC18O15417 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 KRT8P22-201ENST00000562317 1415 ntBASIC18.19■□□□□ 0.5
TNRC18O15417 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TNRC18O15417 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
TNRC18O15417 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.19■□□□□ 0.5
TNRC18O15417 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.19■□□□□ 0.5
TNRC18O15417 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNRC18O15417 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNRC18O15417 AC134698.3-201ENST00000523880 214 ntBASIC18.18■□□□□ 0.5
TNRC18O15417 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.18■□□□□ 0.5
TNRC18O15417 AC079316.1-201ENST00000548397 411 ntBASIC18.18■□□□□ 0.5
TNRC18O15417 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.18■□□□□ 0.5
TNRC18O15417 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.18■□□□□ 0.5
TNRC18O15417 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TNRC18O15417 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.18■□□□□ 0.5
TNRC18O15417 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.18■□□□□ 0.5
TNRC18O15417 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNRC18O15417 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNRC18O15417 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TNRC18O15417 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TNRC18O15417 ACTG1P3-201ENST00000431775 1114 ntBASIC18.18■□□□□ 0.5
TNRC18O15417 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms