Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDH17O14917 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH17O14917 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 AC009336.1-201ENST00000608941 1553 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDH17O14917 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PCDH17O14917 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH17O14917 AL118508.1-201ENST00000613502 2345 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH17O14917 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDH17O14917 AC106886.4-201ENST00000623557 2502 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 KRT18P27-201ENST00000427733 1299 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 AL591424.1-201ENST00000442569 1213 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH17O14917 RPL13AP23-201ENST00000480739 586 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH17O14917 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH17O14917 AC005593.1-201ENST00000624894 515 ntBASIC16.34■□□□□ 0.21
PCDH17O14917 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDH17O14917 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH17O14917 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH17O14917 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH17O14917 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH17O14917 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH17O14917 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDH17O14917 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH17O14917 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
PCDH17O14917 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.21
PCDH17O14917 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 AC136632.2-201ENST00000512891 861 ntBASIC16.33■□□□□ 0.2
PCDH17O14917 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDH17O14917 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH17O14917 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH17O14917 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH17O14917 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH17O14917 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH17O14917 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH17O14917 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH17O14917 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH17O14917 UBALD1-205ENST00000590891 2641 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms