Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBFD1O14562 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
UBFD1O14562 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 ARMC10P1-201ENST00000313754 855 ntBASIC16.58■□□□□ 0.24
UBFD1O14562 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.58■□□□□ 0.24
UBFD1O14562 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.58■□□□□ 0.24
UBFD1O14562 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
UBFD1O14562 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.58■□□□□ 0.24
UBFD1O14562 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
UBFD1O14562 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.58■□□□□ 0.24
UBFD1O14562 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.58■□□□□ 0.24
UBFD1O14562 AC074051.2-201ENST00000565115 352 ntBASIC16.58■□□□□ 0.24
UBFD1O14562 AL445228.2-201ENST00000605589 952 ntBASIC16.58■□□□□ 0.24
UBFD1O14562 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
UBFD1O14562 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
UBFD1O14562 IER3-202ENST00000376377 1350 ntBASIC16.58■□□□□ 0.24
UBFD1O14562 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBFD1O14562 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 AC097637.2-201ENST00000624096 1997 ntBASIC16.58■□□□□ 0.24
UBFD1O14562 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.58■□□□□ 0.24
UBFD1O14562 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBFD1O14562 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
UBFD1O14562 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.57■□□□□ 0.24
UBFD1O14562 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBFD1O14562 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
UBFD1O14562 AC008894.3-201ENST00000624324 3103 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
UBFD1O14562 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 PCDHA1-201ENST00000378133 2726 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 SIGLEC16-201ENST00000599858 1437 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 AP002414.1-201ENST00000391405 1147 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.56■□□□□ 0.24
UBFD1O14562 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.56■□□□□ 0.24
UBFD1O14562 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 NPAP1P7-201ENST00000613027 823 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 AC073592.4-201ENST00000623827 446 ntBASIC16.56■□□□□ 0.24
UBFD1O14562 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms