Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC7O00311 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC7O00311 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.77■□□□□ 0.28
CDC7O00311 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
CDC7O00311 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 AL356309.3-201ENST00000624132 1934 ntBASIC16.77■□□□□ 0.28
CDC7O00311 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CDC7O00311 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 DUX4L17-201ENST00000557360 1267 ntBASIC16.77■□□□□ 0.28
CDC7O00311 PRELID1P1-202ENST00000567272 903 ntBASIC16.77■□□□□ 0.28
CDC7O00311 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.77■□□□□ 0.28
CDC7O00311 AL353135.1-201ENST00000606729 504 ntBASIC16.77■□□□□ 0.28
CDC7O00311 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC7O00311 AL022326.1-202ENST00000641533 845 ntBASIC16.77■□□□□ 0.28
CDC7O00311 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CDC7O00311 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC7O00311 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.77■□□□□ 0.27
CDC7O00311 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDC7O00311 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CDC7O00311 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDC7O00311 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDC7O00311 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 AL590787.1-201ENST00000568856 1315 ntBASIC16.76■□□□□ 0.27
CDC7O00311 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.76■□□□□ 0.27
CDC7O00311 SART3-203ENST00000546611 1184 ntBASIC16.76■□□□□ 0.27
CDC7O00311 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 AC091304.2-201ENST00000564639 760 ntBASIC16.76■□□□□ 0.27
CDC7O00311 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.76■□□□□ 0.27
CDC7O00311 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.76■□□□□ 0.27
CDC7O00311 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 AL355877.3-201ENST00000622820 899 ntBASIC16.76■□□□□ 0.27
CDC7O00311 AC012313.10-201ENST00000623509 926 ntBASIC16.76■□□□□ 0.27
CDC7O00311 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC7O00311 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC7O00311 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDC7O00311 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms