Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC004980.1-204ENST00000429707 299 ntBASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AL355355.2-201ENST00000442321 338 ntBASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC105036.2-201ENST00000569468 176 ntBASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.84□□□□□ -0.67
TMEM256-PLSCR3K7ERE1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TMEM256-PLSCR3K7ERE1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms