Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 ARSEP1-201ENST00000420443 635 ntBASIC16.65■□□□□ 0.26
C4orf47A7E2U8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C4orf47A7E2U8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
C4orf47A7E2U8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.64■□□□□ 0.26
C4orf47A7E2U8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
C4orf47A7E2U8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.64■□□□□ 0.25
C4orf47A7E2U8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 AL135999.2-201ENST00000622438 1686 ntBASIC16.64■□□□□ 0.25
C4orf47A7E2U8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.64■□□□□ 0.25
C4orf47A7E2U8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 ABALON-201ENST00000629058 1903 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 HMGA1P7-201ENST00000406908 502 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 AC107918.2-201ENST00000530817 355 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 ALG1L8P-201ENST00000533887 760 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 AC084121.4-201ENST00000641598 221 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 AF228730.8-201ENST00000642140 221 ntBASIC16.63■□□□□ 0.25
C4orf47A7E2U8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C4orf47A7E2U8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms