Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 TSSK5P-201ENST00000423978 907 ntBASIC18.21■□□□□ 0.51
LCHNA4D1U4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 AC027307.2-201ENST00000591252 911 ntBASIC18.21■□□□□ 0.51
LCHNA4D1U4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 AC100757.3-201ENST00000622361 1406 ntBASIC18.21■□□□□ 0.51
LCHNA4D1U4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCHNA4D1U4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LCHNA4D1U4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 MIR346-201ENST00000362234 95 ntBASIC18.2■□□□□ 0.5
LCHNA4D1U4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 AC008267.7-201ENST00000624570 1194 ntBASIC18.2■□□□□ 0.5
LCHNA4D1U4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.2■□□□□ 0.5
LCHNA4D1U4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCHNA4D1U4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.19■□□□□ 0.5
LCHNA4D1U4 AC027369.6-201ENST00000525520 931 ntBASIC18.19■□□□□ 0.5
LCHNA4D1U4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 AL590560.3-201ENST00000623350 461 ntBASIC18.19■□□□□ 0.5
LCHNA4D1U4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.19■□□□□ 0.5
LCHNA4D1U4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCHNA4D1U4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCHNA4D1U4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
LCHNA4D1U4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms