Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 AL589182.2-201ENST00000619332 1049 ntBASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC162PA2VCL2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 AC025062.2-201ENST00000605477 670 ntBASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC162PA2VCL2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 AC139887.3-201ENST00000568585 713 ntBASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC162PA2VCL2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms