Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 AC008894.3-201ENST00000624324 3103 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 AC079776.2-201ENST00000641154 1609 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 NUS1P2-201ENST00000417358 873 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 AC012615.1-201ENST00000565797 1299 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 AC069148.1-201ENST00000608741 768 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 AC073592.4-201ENST00000623827 446 ntBASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV7S3A2A0A539 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ATP5G2P1-201ENST00000433580 426 ntBASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 KRT18P35-201ENST00000510488 1269 ntBASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV7S3A2A0A539 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 AP002414.1-201ENST00000391405 1147 ntBASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 AP001269.4-201ENST00000609611 512 ntBASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 CICP6-201ENST00000457191 2729 ntBASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV7S3A2A0A539 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms