Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 MRPL3P1-201ENST00000400109 1033 ntBASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC012640.2-201ENST00000561606 901 ntBASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC25A6P4-201ENST00000586535 553 ntBASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC008667.4-201ENST00000607370 168 ntBASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC196A0A1B0GTZ2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC196A0A1B0GTZ2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 IGHV3-65-201ENST00000523210 341 ntBASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 AP002490.2-201ENST00000524791 560 ntBASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 DUX4L17-201ENST00000557360 1267 ntBASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms