Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRGV1A0A0A0MS02 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 KRT16P4-201ENST00000453883 522 ntBASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 FOSL1P1-201ENST00000511041 816 ntBASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 MIR5100-201ENST00000579544 119 ntBASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 AL135999.2-201ENST00000622438 1686 ntBASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 AC067930.6-201ENST00000623257 4947 ntBASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRGV1A0A0A0MS02 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 AL020989.1-201ENST00000422979 469 ntBASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV1A0A0A0MS02 SIGLEC30P-201ENST00000455569 941 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms