Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 C20orf181-201ENST00000623918 480 ntBASIC16.8■□□□□ 0.28
SATB2Q9UPW6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 GNAS-203ENST00000306120 1878 ntBASIC16.8■□□□□ 0.28
SATB2Q9UPW6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SATB2Q9UPW6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AC009053.2-201ENST00000563701 2365 ntBASIC16.79■□□□□ 0.28
SATB2Q9UPW6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
SATB2Q9UPW6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 AL078644.1-201ENST00000609881 752 ntBASIC16.79■□□□□ 0.28
SATB2Q9UPW6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SATB2Q9UPW6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AC008894.3-201ENST00000624324 3103 ntBASIC16.78■□□□□ 0.28
SATB2Q9UPW6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 CNN2P11-201ENST00000429351 262 ntBASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AL513190.1-201ENST00000621254 727 ntBASIC16.78■□□□□ 0.28
SATB2Q9UPW6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 NCF1C-201ENST00000438382 1427 ntBASIC16.78■□□□□ 0.28
SATB2Q9UPW6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SATB2Q9UPW6 AC148477.5-201ENST00000625164 1645 ntBASIC16.78■□□□□ 0.28
SATB2Q9UPW6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SATB2Q9UPW6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SATB2Q9UPW6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SATB2Q9UPW6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms