Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDZRN3Q9UPQ7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AC084018.2-201ENST00000613093 2607 ntBASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 ACTG1P14-201ENST00000446382 1122 ntBASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AC006504.4-201ENST00000592118 1568 ntBASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 AL353593.2-201ENST00000602529 1483 ntBASIC22.02■■□□□ 1.12
PDZRN3Q9UPQ7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PDZRN3Q9UPQ7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PDZRN3Q9UPQ7 AC011676.5-201ENST00000624864 2660 ntBASIC22.02■■□□□ 1.11
PDZRN3Q9UPQ7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC22.02■■□□□ 1.11
PDZRN3Q9UPQ7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 MIR770-201ENST00000390219 98 ntBASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 CEND1P1-201ENST00000451006 455 ntBASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 AC011467.4-201ENST00000594891 528 ntBASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDZRN3Q9UPQ7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 RPS15P9-201ENST00000494093 319 ntBASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 BX276092.7-203ENST00000637198 1536 ntBASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDZRN3Q9UPQ7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PDZRN3Q9UPQ7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms