Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.02■□□□□ 0.47
CDH9Q9ULB4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH9Q9ULB4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AC112482.1-201ENST00000492080 688 ntBASIC18.01■□□□□ 0.47
CDH9Q9ULB4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AC139713.2-201ENST00000641328 2723 ntBASIC18.01■□□□□ 0.47
CDH9Q9ULB4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH9Q9ULB4 AL353732.1-201ENST00000569618 1459 ntBASIC18.01■□□□□ 0.47
CDH9Q9ULB4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 COA5-202ENST00000409997 557 ntTSL 4 BASIC18■□□□□ 0.47
CDH9Q9ULB4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18■□□□□ 0.47
CDH9Q9ULB4 MIR4515-201ENST00000584082 81 ntBASIC18■□□□□ 0.47
CDH9Q9ULB4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 AC139530.3-201ENST00000620344 690 ntBASIC18■□□□□ 0.47
CDH9Q9ULB4 C20orf181-201ENST00000623918 480 ntBASIC18■□□□□ 0.47
CDH9Q9ULB4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH9Q9ULB4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH9Q9ULB4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH9Q9ULB4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 KRT8P49-201ENST00000604166 1432 ntBASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH9Q9ULB4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms