Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPA4Q9UI42 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPA4Q9UI42 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPA4Q9UI42 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.31■□□□□ 0.68
CPA4Q9UI42 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPA4Q9UI42 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.31■□□□□ 0.68
CPA4Q9UI42 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPA4Q9UI42 LINC00304-203ENST00000565008 1864 ntBASIC19.31■□□□□ 0.68
CPA4Q9UI42 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 AC007541.1-201ENST00000570282 1469 ntBASIC19.3■□□□□ 0.68
CPA4Q9UI42 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 GPR53P-205ENST00000457298 1084 ntBASIC19.3■□□□□ 0.68
CPA4Q9UI42 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 AC009407.1-201ENST00000568958 598 ntBASIC19.3■□□□□ 0.68
CPA4Q9UI42 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 AC008738.7-201ENST00000609744 511 ntBASIC19.3■□□□□ 0.68
CPA4Q9UI42 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPA4Q9UI42 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.3■□□□□ 0.68
CPA4Q9UI42 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC009477.1-201ENST00000452936 217 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 HLA-V-204ENST00000476601 1289 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC091167.2-201ENST00000579581 588 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 AL132655.2-201ENST00000596276 594 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC093503.3-201ENST00000624917 2352 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 TOP3BP1-201ENST00000420768 1380 ntBASIC19.29■□□□□ 0.68
CPA4Q9UI42 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.29■□□□□ 0.68
CPA4Q9UI42 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPA4Q9UI42 AC138969.3-201ENST00000546612 1459 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 AC138932.2-201ENST00000548268 1459 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 AC126755.4-201ENST00000549796 1459 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 AC105233.2-201ENST00000523697 349 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 AF228730.5-201ENST00000530288 346 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 AC010336.2-201ENST00000564226 506 ntBASIC19.28■□□□□ 0.68
CPA4Q9UI42 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPA4Q9UI42 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CPA4Q9UI42 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPA4Q9UI42 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms