Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 BASP1P1-201ENST00000430708 665 ntBASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AC125807.1-201ENST00000483097 614 ntBASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AL031055.1-201ENST00000606362 631 ntBASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2IRD1Q9UHL9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 AC008677.1-201ENST00000519230 1561 ntBASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 MIR3909-201ENST00000579518 119 ntBASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2IRD1Q9UHL9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 SPDYE7P-202ENST00000420373 878 ntBASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 SLC25A39P2-201ENST00000537614 270 ntBASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 AC140878.1-201ENST00000565277 250 ntBASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2IRD1Q9UHL9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.66■□□□□ 0.58
GTF2IRD1Q9UHL9 SLC25A1P3-201ENST00000395415 828 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms