Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 COX5BP2-201ENST00000392354 334 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 AP002383.4-201ENST00000442518 975 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 TPSP2-201ENST00000561760 610 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 AC092329.2-201ENST00000598402 547 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 Z69720.1-201ENST00000601483 472 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 AL603756.1-201ENST00000606511 2163 ntBASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 SLC25A1P3-201ENST00000395415 828 ntBASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 AL353801.3-201ENST00000609898 542 ntBASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 FLJ38576-201ENST00000623820 2459 ntBASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LIN7CQ9NUP9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 AC063926.3-201ENST00000624734 5658 ntBASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TOB2P1-201ENST00000469761 992 ntBASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.24□□□□□ -0.13
LIN7CQ9NUP9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms