Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRMT13Q9NUP7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 BICD1-207ENST00000551848 1962 ntBASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 MIR346-201ENST00000362234 95 ntBASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 MIR4453-201ENST00000584019 89 ntBASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.63■□□□□ 0.57
TRMT13Q9NUP7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC016027.1-202ENST00000607927 1699 ntBASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRMT13Q9NUP7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 AP005018.1-201ENST00000525475 301 ntBASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 AL138918.1-201ENST00000568306 659 ntBASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRMT13Q9NUP7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.6■□□□□ 0.57
TRMT13Q9NUP7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms