Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 IL9RP2-201ENST00000423948 1312 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 TUBB7P-202ENST00000428444 1305 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 TUBB8P7-204ENST00000567960 1332 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 AD000864.1-201ENST00000624076 2295 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 OR6D1P-202ENST00000641007 5290 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 OR7E47P-204ENST00000575924 449 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 AL021920.2-201ENST00000624828 1351 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 PCDHB17P-201ENST00000539533 2393 ntBASIC20.79■□□□□ 0.92
ECHDC1Q9NTX5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 MRPL20P1-201ENST00000400819 433 ntBASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 KRT8P49-201ENST00000604166 1432 ntBASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHDC1Q9NTX5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 PCDHA12-202ENST00000613593 2588 ntBASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 AL590627.1-203ENST00000421194 1026 ntBASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 Z83851.2-201ENST00000609564 659 ntBASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 BX640515.1-201ENST00000617215 977 ntBASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHDC1Q9NTX5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ECHDC1Q9NTX5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ECHDC1Q9NTX5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 AC107918.2-201ENST00000530817 355 ntBASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 AC145285.3-201ENST00000564603 959 ntBASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHDC1Q9NTX5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms