Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 WNK4-204ENST00000591448 3909 ntTSL 1 (best)16.34■□□□□ 0.212e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-232ENST00000557442 1308 ntTSL 216.21■□□□□ 0.192e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-209ENST00000554383 1039 ntTSL 516■□□□□ 0.152e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-218ENST00000555215 781 ntTSL 516■□□□□ 0.152e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC15.84■□□□□ 0.132e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC15.63■□□□□ 0.092e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-216ENST00000555137 789 ntTSL 315.43■□□□□ 0.062e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-224ENST00000556226 629 ntTSL 515.43■□□□□ 0.062e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC15.35■□□□□ 0.052e-10■□□□□ 8.9
DROSHAQ9NRR4 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.012e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-228ENST00000557033 760 ntTSL 315□□□□□ -0.012e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-207ENST00000553614 604 ntTSL 514.52□□□□□ -0.082e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC14.32□□□□□ -0.122e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.182e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-212ENST00000554539 748 ntTSL 513.83□□□□□ -0.192e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.522e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC11.57□□□□□ -0.562e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.572e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-221ENST00000556259 548 ntTSL 311.42□□□□□ -0.582e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC11.07□□□□□ -0.642e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-215ENST00000555127 929 ntTSL 210.16□□□□□ -0.782e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-233ENST00000557768 599 ntTSL 38.54□□□□□ -1.042e-10■□□□□ 8.9
DROSHAQ9NRR4 WNK4-203ENST00000587745 188 ntTSL 55.95□□□□□ -1.462e-10■□□□□ 8.9
DROSHAQ9NRR4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.142e-6■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC41.76■■■■■ 4.283e-6■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-203ENST00000487207 735 ntTSL 224.47■■□□□ 1.513e-6■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC24.26■■□□□ 1.473e-6■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC24.23■■□□□ 1.473e-6■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-204ENST00000491976 2807 ntTSL 224.02■■□□□ 1.443e-6■□□□□ 8.9
DROSHAQ9NRR4 CFB-272ENST00000452035 1866 ntTSL 223.58■■□□□ 1.361e-8■□□□□ 8.9
DROSHAQ9NRR4 CFB-278ENST00000472581 1059 ntTSL 223.46■■□□□ 1.351e-8■□□□□ 8.9
DROSHAQ9NRR4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC22.35■■□□□ 1.173e-6■□□□□ 8.9
DROSHAQ9NRR4 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC19.61■□□□□ 0.731e-6■□□□□ 8.9
DROSHAQ9NRR4 CFB-273ENST00000460718 768 ntTSL 517.63■□□□□ 0.411e-8■□□□□ 8.9
DROSHAQ9NRR4 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.191e-8■□□□□ 8.9
DROSHAQ9NRR4 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC15.7■□□□□ 0.11e-8■□□□□ 8.9
DROSHAQ9NRR4 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.321e-8■□□□□ 8.9
DROSHAQ9NRR4 CFB-279ENST00000475617 586 ntTSL 411.46□□□□□ -0.571e-8■□□□□ 8.9
DROSHAQ9NRR4 NEAT1_1.1-201ENST00000620348 120 ntBASIC17.76■□□□□ 0.434e-89■□□□□ 8.9
DROSHAQ9NRR4 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.332e-8■□□□□ 8.9
DROSHAQ9NRR4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.12e-19■□□□□ 8.9
DROSHAQ9NRR4 SRSF9-202ENST00000546942 946 ntTSL 1 (best)40.63■■■■■ 4.12e-19■□□□□ 8.9
DROSHAQ9NRR4 SRSF9-206ENST00000603963 1043 ntTSL 533.6■■■□□ 2.972e-19■□□□□ 8.9
DROSHAQ9NRR4 SRSF9-205ENST00000550458 327 ntTSL 318.4■□□□□ 0.542e-19■□□□□ 8.9
DROSHAQ9NRR4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC27.78■■■□□ 2.042e-8■□□□□ 8.8
DROSHAQ9NRR4 ASGR1-206ENST00000573596 2083 ntTSL 527.33■■□□□ 1.972e-8■□□□□ 8.8
DROSHAQ9NRR4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.152e-8■□□□□ 8.8
DROSHAQ9NRR4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.07■□□□□ 0.962e-8■□□□□ 8.8
DROSHAQ9NRR4 ASGR1-205ENST00000573083 855 ntTSL 315.26■□□□□ 0.032e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-207ENST00000525995 592 ntTSL 432.76■■■□□ 2.831e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-218ENST00000531416 1969 ntTSL 224.05■■□□□ 1.441e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)17.38■□□□□ 0.371e-6■□□□□ 8.8
DROSHAQ9NRR4 ATXN2L-219ENST00000566007 471 ntTSL 314.17□□□□□ -0.141e-18■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.821e-6■□□□□ 8.8
DROSHAQ9NRR4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC38.4■■■■□ 3.742e-7■□□□□ 8.8
DROSHAQ9NRR4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC36.91■■■■□ 3.52e-7■□□□□ 8.8
DROSHAQ9NRR4 CLK2-205ENST00000476983 1885 ntTSL 1 (best)29.97■■■□□ 2.392e-7■□□□□ 8.8
DROSHAQ9NRR4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.962e-7■□□□□ 8.8
DROSHAQ9NRR4 CLK2-204ENST00000471047 701 ntTSL 315□□□□□ -0.012e-7■□□□□ 8.8
DROSHAQ9NRR4 RAP1A-203ENST00000433097 666 ntTSL 527.09■■□□□ 1.932e-11■□□□□ 8.8
DROSHAQ9NRR4 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.792e-11■□□□□ 8.8
DROSHAQ9NRR4 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.042e-11■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-212ENST00000558004 587 ntTSL 528.28■■■□□ 2.124e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC27.54■■■□□ 24e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-216ENST00000561149 529 ntTSL 425.48■■□□□ 1.674e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC24.61■■□□□ 1.534e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-213ENST00000558733 995 ntTSL 322.82■■□□□ 1.244e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-215ENST00000560608 587 ntTSL 421.78■■□□□ 1.084e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-204ENST00000439637 601 ntTSL 321.41■■□□□ 1.024e-7■□□□□ 8.8
DROSHAQ9NRR4 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.634e-7■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-201ENST00000352800 611 ntTSL 533.09■■■□□ 2.893e-8■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.38■■■□□ 2.772e-6■□□□□ 8.8
DROSHAQ9NRR4 HIPK3-205ENST00000531504 591 ntTSL 232.03■■■□□ 2.725e-8■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.62e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-204ENST00000422442 564 ntTSL 530.6■■■□□ 2.493e-8■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-205ENST00000589183 796 ntTSL 328.76■■■□□ 2.22e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.172e-6■□□□□ 8.8
DROSHAQ9NRR4 PPT2-EGFL8-201ENST00000421600 999 ntAPPRIS ALT2 TSL 528.5■■■□□ 2.152e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-237ENST00000485712 474 ntTSL 428.47■■■□□ 2.152e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-219ENST00000627825 312 ntTSL 528.24■■■□□ 2.113e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-203ENST00000422066 604 ntTSL 428.11■■■□□ 2.093e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-209ENST00000431421 550 ntTSL 428.11■■■□□ 2.093e-8■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.062e-6■□□□□ 8.8
DROSHAQ9NRR4 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)27.7■■■□□ 2.035e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-202ENST00000413084 592 ntTSL 427.23■■□□□ 1.953e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-217ENST00000626672 568 ntTSL 427.23■■□□□ 1.953e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-225ENST00000636187 171 ntTSL 527.19■■□□□ 1.943e-8■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-204ENST00000589168 2125 ntTSL 226.92■■□□□ 1.92e-6■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.56■■□□□ 1.842e-6■□□□□ 8.8
DROSHAQ9NRR4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.782e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-201ENST00000304834 1633 ntTSL 1 (best)25.65■■□□□ 1.72e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-208ENST00000413967 2808 ntTSL 225.57■■□□□ 1.682e-6■□□□□ 8.8
DROSHAQ9NRR4 SYNGR2-208ENST00000591770 864 ntTSL 225.54■■□□□ 1.682e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-206ENST00000427349 554 ntTSL 325.26■■□□□ 1.633e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-226ENST00000450424 2658 ntTSL 525.19■■□□□ 1.622e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-210ENST00000431674 559 ntTSL 424.73■■□□□ 1.553e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-213ENST00000450267 588 ntTSL 324.73■■□□□ 1.553e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-210ENST00000421110 2755 ntTSL 524.7■■□□□ 1.542e-6■□□□□ 8.8
DROSHAQ9NRR4 SF3A2-204ENST00000589118 759 ntTSL 224.42■■□□□ 1.55e-8■□□□□ 8.8
Retrieved 100 of 16,331 protein–RNA pairs in 283 ms