Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 IGHV3-22-201ENST00000520721 359 ntBASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AC117500.6-201ENST00000624871 588 ntBASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AL805961.1-202ENST00000641562 540 ntBASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRDM9Q9NQV7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 AC012497.1-201ENST00000429392 575 ntBASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 TUBB8P12-201ENST00000308911 1335 ntBASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 TUBB7P-202ENST00000428444 1305 ntBASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 TUBB8P7-204ENST00000567960 1332 ntBASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.17■□□□□ 0.18
PRDM9Q9NQV7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 AP002490.2-201ENST00000524791 560 ntBASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 AF228730.7-201ENST00000641842 219 ntBASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms