Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 SART3-203ENST00000546611 1184 ntBASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 AL160237.2-201ENST00000556165 472 ntBASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AP002469.2-201ENST00000531724 424 ntBASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 STK25P1-201ENST00000585406 838 ntBASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 NKAPP1-205ENST00000585790 367 ntBASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AL356309.3-201ENST00000624132 1934 ntBASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AC079776.2-201ENST00000641154 1609 ntBASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NECTIN3Q9NQS3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.43■□□□□ 0.22
NECTIN3Q9NQS3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms