Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 FAM207BP-201ENST00000447172 505 ntBASIC20.28■□□□□ 0.84
RTN4Q9NQC3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 AL353807.1-201ENST00000427475 662 ntBASIC20.27■□□□□ 0.84
RTN4Q9NQC3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTN4Q9NQC3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.27■□□□□ 0.83
RTN4Q9NQC3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 AC068587.6-202ENST00000641839 5619 ntBASIC20.27■□□□□ 0.83
RTN4Q9NQC3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.27■□□□□ 0.83
RTN4Q9NQC3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 MIR564-202ENST00000385049 94 ntBASIC20.26■□□□□ 0.83
RTN4Q9NQC3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.26■□□□□ 0.83
RTN4Q9NQC3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 AC073347.1-201ENST00000421633 2643 ntBASIC20.26■□□□□ 0.83
RTN4Q9NQC3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTN4Q9NQC3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTN4Q9NQC3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms