Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 AL031432.5-201ENST00000641059 760 ntBASIC19.13■□□□□ 0.65
CBX8Q9HC52 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 AC125634.1-201ENST00000438758 1403 ntBASIC19.13■□□□□ 0.65
CBX8Q9HC52 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CBX8Q9HC52 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.13■□□□□ 0.65
CBX8Q9HC52 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 AC005052.1-201ENST00000625181 2492 ntBASIC19.12■□□□□ 0.65
CBX8Q9HC52 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 AC010203.1-204ENST00000548782 407 ntBASIC19.12■□□□□ 0.65
CBX8Q9HC52 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.12■□□□□ 0.65
CBX8Q9HC52 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CBX8Q9HC52 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 Z83836.1-201ENST00000624605 1642 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AC009336.1-201ENST00000608941 1553 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 MTHFR-217ENST00000641820 1569 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 HBZP1-201ENST00000354915 429 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AC103564.2-201ENST00000432853 1299 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 VENTXP5-201ENST00000523979 775 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 AP002490.2-201ENST00000524791 560 ntBASIC19.11■□□□□ 0.65
CBX8Q9HC52 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX8Q9HC52 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CBX8Q9HC52 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX8Q9HC52 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.1■□□□□ 0.65
CBX8Q9HC52 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.1■□□□□ 0.65
CBX8Q9HC52 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX8Q9HC52 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CBX8Q9HC52 ME2P1-201ENST00000426028 1970 ntBASIC19.1■□□□□ 0.65
CBX8Q9HC52 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBX8Q9HC52 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CBX8Q9HC52 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms