Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VPS11Q9H270 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
VPS11Q9H270 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VPS11Q9H270 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VPS11Q9H270 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 AC125634.1-201ENST00000438758 1403 ntBASIC17.24■□□□□ 0.35
VPS11Q9H270 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS11Q9H270 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS11Q9H270 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.24■□□□□ 0.35
VPS11Q9H270 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS11Q9H270 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VPS11Q9H270 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS11Q9H270 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VPS11Q9H270 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
VPS11Q9H270 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS11Q9H270 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS11Q9H270 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 AL645929.1-201ENST00000420084 975 ntBASIC17.23■□□□□ 0.35
VPS11Q9H270 TSPY22P-201ENST00000427496 604 ntBASIC17.23■□□□□ 0.35
VPS11Q9H270 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 AL592071.1-201ENST00000611956 408 ntBASIC17.23■□□□□ 0.35
VPS11Q9H270 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VPS11Q9H270 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS11Q9H270 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 NFIC-211ENST00000641145 8399 ntBASIC17.23■□□□□ 0.35
VPS11Q9H270 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.23■□□□□ 0.35
VPS11Q9H270 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS11Q9H270 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS11Q9H270 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
VPS11Q9H270 KRT8P10-201ENST00000450021 1447 ntBASIC17.22■□□□□ 0.35
VPS11Q9H270 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms