Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 RCN1P1-201ENST00000400413 996 ntBASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 BX276092.5-203ENST00000456199 560 ntBASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
POLR2J3Q9H1A7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 AP002490.2-201ENST00000524791 560 ntBASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 RN7SL850P-201ENST00000579959 291 ntBASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
POLR2J3Q9H1A7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 AL135999.2-201ENST00000622438 1686 ntBASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
POLR2J3Q9H1A7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms