Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.59■□□□□ 0.89
RTFDC1Q9BY42 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.59■□□□□ 0.89
RTFDC1Q9BY42 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTFDC1Q9BY42 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
RTFDC1Q9BY42 NEFHP1-201ENST00000412845 2629 ntBASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 MEIS3P1-201ENST00000495167 958 ntBASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 AL596325.1-201ENST00000563991 1082 ntBASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 AC009118.2-201ENST00000613275 655 ntBASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTFDC1Q9BY42 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTFDC1Q9BY42 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 NME2P1-201ENST00000426182 414 ntBASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 AC027307.3-201ENST00000594262 1100 ntBASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 AC073389.1-201ENST00000595595 795 ntBASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTFDC1Q9BY42 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 NOC2LP1-202ENST00000452600 2235 ntBASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AC027369.6-201ENST00000525520 931 ntBASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 RARRES2P9-201ENST00000565168 469 ntBASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 AC018529.1-201ENST00000613063 361 ntBASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTFDC1Q9BY42 EGFEM1P-202ENST00000431685 1563 ntBASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 MPDU1-223ENST00000582151 728 ntBASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTFDC1Q9BY42 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms