Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 FAM220BP-201ENST00000377689 816 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC069218.1-201ENST00000435269 762 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AL162726.2-201ENST00000438986 1017 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC004898.1-201ENST00000451057 766 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 DUTP2-201ENST00000519164 463 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC145423.3-201ENST00000615987 467 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC026310.3-201ENST00000625186 2373 ntBASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.03■□□□□ 0.32
COL25A1Q9BXS0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AL135999.2-201ENST00000622438 1686 ntBASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AC007969.1-201ENST00000433675 447 ntBASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 CU634019.7-201ENST00000624153 1185 ntBASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 FP236241.2-201ENST00000624906 1185 ntBASIC17.02■□□□□ 0.32
COL25A1Q9BXS0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL25A1Q9BXS0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL25A1Q9BXS0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
COL25A1Q9BXS0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.02■□□□□ 0.31
COL25A1Q9BXS0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COL25A1Q9BXS0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 AC006480.2-201ENST00000609770 1337 ntBASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 MIR3147-201ENST00000577811 66 ntBASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 DGAT2L7P-201ENST00000602462 744 ntBASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL25A1Q9BXS0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms