Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP3Q9BWW4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 OR6D1P-203ENST00000641209 4860 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 MRPL20P1-201ENST00000400819 433 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 AC023511.2-201ENST00000618803 211 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 AL590787.1-201ENST00000568856 1315 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 PI4KAP1-204ENST00000612579 1703 ntBASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP3Q9BWW4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 PRSS29P-201ENST00000440800 595 ntBASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 AC064836.3-201ENST00000607928 673 ntBASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSBP3Q9BWW4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SSBP3Q9BWW4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms