Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RPS2P55-201ENST00000397318 883 ntBASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 AC107956.1-201ENST00000494359 873 ntBASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 AC010653.2-201ENST00000623505 997 ntBASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP4Q9BWG4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 LINC02012-201ENST00000608206 1725 ntBASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP4Q9BWG4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms