Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 AC078925.2-201ENST00000624013 1973 ntBASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP25Q9BV90 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 PTCHD3P3-201ENST00000403073 906 ntBASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 HNRNPDP1-201ENST00000439535 754 ntBASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 AC099398.1-201ENST00000567919 2776 ntBASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP25Q9BV90 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 FLJ38576-201ENST00000623820 2459 ntBASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 KRT18P27-201ENST00000427733 1299 ntBASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 KRT18P67-201ENST00000432816 1264 ntBASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 AC148477.8-201ENST00000624298 468 ntBASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRNP25Q9BV90 TUBB8P12-201ENST00000308911 1335 ntBASIC17.71■□□□□ 0.42
SNRNP25Q9BV90 TUBB7P-202ENST00000428444 1305 ntBASIC17.71■□□□□ 0.42
SNRNP25Q9BV90 TUBB8P7-204ENST00000567960 1332 ntBASIC17.71■□□□□ 0.42
SNRNP25Q9BV90 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 AC073621.1-201ENST00000392730 636 ntBASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 FAAHP1-202ENST00000446499 1238 ntBASIC17.7■□□□□ 0.42
SNRNP25Q9BV90 PAWRP1-201ENST00000451083 565 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms