Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 AL353801.3-201ENST00000609898 542 ntBASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HDHD3Q9BSH5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AC009336.1-201ENST00000608941 1553 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AC091607.1-201ENST00000490318 1060 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AC063952.2-201ENST00000498792 1227 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 STK19B-204ENST00000512515 211 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AC011840.4-201ENST00000578471 627 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 IGHV3-41-201ENST00000613121 348 ntBASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDHD3Q9BSH5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 AL353593.2-201ENST00000602529 1483 ntBASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 AC211429.1-201ENST00000415277 523 ntBASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 AC022616.7-201ENST00000525383 220 ntBASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDHD3Q9BSH5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms