Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 TPSP2-201ENST00000561760 610 ntBASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM56Q9BRZ2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AC246785.2-201ENST00000432512 513 ntBASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AP002414.4-201ENST00000589764 1148 ntBASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM56Q9BRZ2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 TOB2P1-201ENST00000469761 992 ntBASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 BNIP3P18-201ENST00000593976 575 ntBASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 AC011467.2-201ENST00000598425 242 ntBASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM56Q9BRZ2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM56Q9BRZ2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.46■□□□□ 0.39
TRIM56Q9BRZ2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms