Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 PCDHA1-201ENST00000378133 2726 ntBASIC16.79■□□□□ 0.28
NPAS2Q99743 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 SLC25A1P3-201ENST00000395415 828 ntBASIC16.79■□□□□ 0.28
NPAS2Q99743 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS2Q99743 IGHV3-47-201ENST00000425060 335 ntBASIC16.79■□□□□ 0.28
NPAS2Q99743 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.79■□□□□ 0.28
NPAS2Q99743 AL732292.2-201ENST00000609649 430 ntBASIC16.79■□□□□ 0.28
NPAS2Q99743 AL139327.4-201ENST00000612362 153 ntBASIC16.79■□□□□ 0.28
NPAS2Q99743 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS2Q99743 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS2Q99743 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS2Q99743 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS2Q99743 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS2Q99743 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPAS2Q99743 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS2Q99743 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 TSPY19P-201ENST00000418461 509 ntBASIC16.78■□□□□ 0.28
NPAS2Q99743 TSPY18P-201ENST00000441642 509 ntBASIC16.78■□□□□ 0.28
NPAS2Q99743 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS2Q99743 FOSL1P1-201ENST00000511041 816 ntBASIC16.78■□□□□ 0.28
NPAS2Q99743 AC074051.2-201ENST00000565115 352 ntBASIC16.78■□□□□ 0.28
NPAS2Q99743 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS2Q99743 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.78■□□□□ 0.28
NPAS2Q99743 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS2Q99743 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS2Q99743 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS2Q99743 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS2Q99743 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS2Q99743 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NPAS2Q99743 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPAS2Q99743 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.77■□□□□ 0.28
NPAS2Q99743 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 AL662844.4-201ENST00000606367 2838 ntBASIC16.77■□□□□ 0.28
NPAS2Q99743 AC093525.9-201ENST00000624961 1746 ntBASIC16.77■□□□□ 0.28
NPAS2Q99743 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPAS2Q99743 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS2Q99743 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 KRT17P6-201ENST00000453795 1220 ntBASIC16.77■□□□□ 0.28
NPAS2Q99743 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 AC104819.1-201ENST00000504587 486 ntBASIC16.77■□□□□ 0.28
NPAS2Q99743 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.77■□□□□ 0.28
NPAS2Q99743 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS2Q99743 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPAS2Q99743 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS2Q99743 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS2Q99743 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS2Q99743 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NPAS2Q99743 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS2Q99743 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
NPAS2Q99743 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NPAS2Q99743 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS2Q99743 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS2Q99743 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms