Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.52□□□□□ -0.4
MUC4Q99102 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MUC4Q99102 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MUC4Q99102 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.52□□□□□ -0.4
MUC4Q99102 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.52□□□□□ -0.4
MUC4Q99102 AC104692.2-201ENST00000603054 253 ntBASIC12.52□□□□□ -0.4
MUC4Q99102 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
MUC4Q99102 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
MUC4Q99102 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.52□□□□□ -0.41
MUC4Q99102 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
MUC4Q99102 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
MUC4Q99102 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 EGFEM1P-202ENST00000431685 1563 ntBASIC12.52□□□□□ -0.41
MUC4Q99102 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
MUC4Q99102 AC008741.2-201ENST00000612792 3115 ntBASIC12.52□□□□□ -0.41
MUC4Q99102 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.52□□□□□ -0.41
MUC4Q99102 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.52□□□□□ -0.41
MUC4Q99102 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.52□□□□□ -0.41
MUC4Q99102 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
MUC4Q99102 COX5BP2-201ENST00000392354 334 ntBASIC12.52□□□□□ -0.41
MUC4Q99102 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.52□□□□□ -0.41
MUC4Q99102 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.52□□□□□ -0.41
MUC4Q99102 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.52□□□□□ -0.41
MUC4Q99102 PRELID1P1-202ENST00000567272 903 ntBASIC12.52□□□□□ -0.41
MUC4Q99102 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.52□□□□□ -0.41
MUC4Q99102 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MUC4Q99102 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MUC4Q99102 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 KRT18P1-202ENST00000452408 1331 ntBASIC12.51□□□□□ -0.41
MUC4Q99102 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
MUC4Q99102 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.51□□□□□ -0.41
MUC4Q99102 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.51□□□□□ -0.41
MUC4Q99102 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
MUC4Q99102 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.51□□□□□ -0.41
MUC4Q99102 AL353593.2-201ENST00000602529 1483 ntBASIC12.51□□□□□ -0.41
MUC4Q99102 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MUC4Q99102 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MUC4Q99102 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
MUC4Q99102 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MUC4Q99102 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MUC4Q99102 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms