Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 AL390955.2-201ENST00000603032 514 ntBASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 AC129492.6-201ENST00000611383 1305 ntBASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC46A1Q96NT5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AC005237.2-201ENST00000434368 219 ntBASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 DUX4L27-201ENST00000554796 1261 ntBASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 Z92544.3-201ENST00000624747 417 ntBASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC46A1Q96NT5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 PMS2P4-201ENST00000412466 1052 ntBASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 AL355306.1-201ENST00000415580 579 ntBASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms