Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CMTM3Q96MX0 LINC00895-201ENST00000629028 1637 ntBASIC14.74□□□□□ -0.05
CMTM3Q96MX0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 RBM17P1-201ENST00000453646 1190 ntBASIC14.73□□□□□ -0.05
CMTM3Q96MX0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AC233702.5-201ENST00000584107 538 ntBASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AL049637.2-201ENST00000641778 930 ntBASIC14.73□□□□□ -0.05
CMTM3Q96MX0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 PAUPAR-201ENST00000630360 2965 ntBASIC14.73□□□□□ -0.05
CMTM3Q96MX0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.73□□□□□ -0.05
CMTM3Q96MX0 AC002310.6-201ENST00000624451 1377 ntBASIC14.73□□□□□ -0.05
CMTM3Q96MX0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 AC103564.2-201ENST00000432853 1299 ntBASIC14.72□□□□□ -0.05
CMTM3Q96MX0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 ECEL1P2-202ENST00000465689 757 ntBASIC14.72□□□□□ -0.05
CMTM3Q96MX0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 AC122714.2-201ENST00000502787 707 ntBASIC14.72□□□□□ -0.05
CMTM3Q96MX0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 MIR4651-201ENST00000582622 73 ntBASIC14.72□□□□□ -0.05
CMTM3Q96MX0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CMTM3Q96MX0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms