Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.35■□□□□ 0.53
ALPK3Q96L96 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.35■□□□□ 0.53
ALPK3Q96L96 AC091167.2-201ENST00000579581 588 ntBASIC18.35■□□□□ 0.53
ALPK3Q96L96 AL139327.4-201ENST00000612362 153 ntBASIC18.35■□□□□ 0.53
ALPK3Q96L96 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALPK3Q96L96 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALPK3Q96L96 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALPK3Q96L96 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 CROCCP3-202ENST00000420820 1947 ntBASIC18.34■□□□□ 0.53
ALPK3Q96L96 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 AL589987.1-201ENST00000453380 819 ntBASIC18.34■□□□□ 0.53
ALPK3Q96L96 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 AC010319.3-201ENST00000597028 470 ntBASIC18.34■□□□□ 0.53
ALPK3Q96L96 AC244093.1-201ENST00000610837 814 ntBASIC18.34■□□□□ 0.53
ALPK3Q96L96 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALPK3Q96L96 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
ALPK3Q96L96 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.33■□□□□ 0.53
ALPK3Q96L96 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 AC114501.2-201ENST00000439631 535 ntBASIC18.33■□□□□ 0.53
ALPK3Q96L96 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 DOC2GP-202ENST00000514950 1163 ntBASIC18.33■□□□□ 0.53
ALPK3Q96L96 SRD5A3P1-201ENST00000603021 949 ntBASIC18.33■□□□□ 0.53
ALPK3Q96L96 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 AC020907.1-201ENST00000616460 1350 ntBASIC18.33■□□□□ 0.53
ALPK3Q96L96 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALPK3Q96L96 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ALPK3Q96L96 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 AC093503.3-201ENST00000624917 2352 ntBASIC18.33■□□□□ 0.52
ALPK3Q96L96 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALPK3Q96L96 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALPK3Q96L96 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 AC123567.1-201ENST00000548294 1261 ntBASIC18.33■□□□□ 0.52
ALPK3Q96L96 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 MIR6869-201ENST00000619434 62 ntBASIC18.33■□□□□ 0.52
ALPK3Q96L96 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.33■□□□□ 0.52
ALPK3Q96L96 AL139099.5-201ENST00000635274 300 ntBASIC18.33■□□□□ 0.52
ALPK3Q96L96 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALPK3Q96L96 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALPK3Q96L96 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALPK3Q96L96 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALPK3Q96L96 LINC00896-202ENST00000609602 2128 ntBASIC18.32■□□□□ 0.52
ALPK3Q96L96 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALPK3Q96L96 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALPK3Q96L96 LINC00304-203ENST00000565008 1864 ntBASIC18.32■□□□□ 0.52
ALPK3Q96L96 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 RN7SL618P-201ENST00000477850 296 ntBASIC18.32■□□□□ 0.52
ALPK3Q96L96 RNA5SP410-201ENST00000516285 106 ntBASIC18.32■□□□□ 0.52
ALPK3Q96L96 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALPK3Q96L96 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.32■□□□□ 0.52
ALPK3Q96L96 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms