Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 RPS2P28-201ENST00000314255 741 ntBASIC17.67■□□□□ 0.42
IFT43Q96FT9 AC003669.1-201ENST00000334569 611 ntBASIC17.67■□□□□ 0.42
IFT43Q96FT9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 KLF4P1-201ENST00000412782 1185 ntBASIC17.67■□□□□ 0.42
IFT43Q96FT9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 AC117500.6-201ENST00000624871 588 ntBASIC17.67■□□□□ 0.42
IFT43Q96FT9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 IL9RP2-201ENST00000423948 1312 ntBASIC17.67■□□□□ 0.42
IFT43Q96FT9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
IFT43Q96FT9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFT43Q96FT9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 AC046185.3-201ENST00000623228 1824 ntBASIC17.66■□□□□ 0.42
IFT43Q96FT9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 PMS2P1-201ENST00000431037 1228 ntBASIC17.66■□□□□ 0.42
IFT43Q96FT9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 RNPS1P1-201ENST00000507437 918 ntBASIC17.66■□□□□ 0.42
IFT43Q96FT9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 MTDHP3-201ENST00000594186 672 ntBASIC17.66■□□□□ 0.42
IFT43Q96FT9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IFT43Q96FT9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IFT43Q96FT9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 FLJ38576-201ENST00000623820 2459 ntBASIC17.65■□□□□ 0.42
IFT43Q96FT9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.65■□□□□ 0.42
IFT43Q96FT9 AC016396.2-201ENST00000562575 1417 ntBASIC17.65■□□□□ 0.42
IFT43Q96FT9 AP005117.1-201ENST00000584346 1413 ntBASIC17.65■□□□□ 0.42
IFT43Q96FT9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IFT43Q96FT9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms