Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 AC011840.4-201ENST00000578471 627 ntBASIC14.93□□□□□ -0.02
CPNE2Q96FN4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 AC066615.1-201ENST00000640911 628 ntBASIC14.93□□□□□ -0.02
CPNE2Q96FN4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CPNE2Q96FN4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 AC126755.1-201ENST00000525846 6405 ntBASIC14.92□□□□□ -0.02
CPNE2Q96FN4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 LINC01023-201ENST00000606054 436 ntBASIC14.92□□□□□ -0.02
CPNE2Q96FN4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE2Q96FN4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 KRT18P38-201ENST00000449496 1282 ntBASIC14.91□□□□□ -0.02
CPNE2Q96FN4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 AC019129.2-201ENST00000609837 1235 ntBASIC14.91□□□□□ -0.02
CPNE2Q96FN4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE2Q96FN4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms