Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 AC009053.2-201ENST00000563701 2365 ntBASIC17.52■□□□□ 0.4
CCDC97Q96F63 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 TP73-AS1-210ENST00000637775 1455 ntBASIC17.52■□□□□ 0.4
CCDC97Q96F63 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 RCN1P2-201ENST00000398357 915 ntBASIC17.52■□□□□ 0.4
CCDC97Q96F63 DDX43P3-201ENST00000441064 443 ntBASIC17.52■□□□□ 0.4
CCDC97Q96F63 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 AC139530.3-201ENST00000620344 690 ntBASIC17.52■□□□□ 0.4
CCDC97Q96F63 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC97Q96F63 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC97Q96F63 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC97Q96F63 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC97Q96F63 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC97Q96F63 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC97Q96F63 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC97Q96F63 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC97Q96F63 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC97Q96F63 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.52■□□□□ 0.39
CCDC97Q96F63 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC97Q96F63 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 MINOS1P3-201ENST00000457048 203 ntBASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC093909.1-201ENST00000504731 1122 ntBASIC17.51■□□□□ 0.39
CCDC97Q96F63 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 REXO1L6P-202ENST00000619970 1078 ntBASIC17.51■□□□□ 0.39
CCDC97Q96F63 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC97Q96F63 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC97Q96F63 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC97Q96F63 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC97Q96F63 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC97Q96F63 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC97Q96F63 AC097374.2-201ENST00000618617 1306 ntBASIC17.5■□□□□ 0.39
CCDC97Q96F63 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC97Q96F63 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC97Q96F63 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC97Q96F63 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
CCDC97Q96F63 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC97Q96F63 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms