Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC116407.2-201ENST00000613639 860 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 AL589182.2-201ENST00000619332 1049 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC138028.4-201ENST00000564984 1845 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 NCF1C-201ENST00000438382 1427 ntBASIC16.53■□□□□ 0.24
RNF31Q96EP0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 CRYGEP-201ENST00000412192 528 ntBASIC16.53■□□□□ 0.24
RNF31Q96EP0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 LINC00982-205ENST00000420957 435 ntBASIC16.53■□□□□ 0.24
RNF31Q96EP0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 MIR3687-2-201ENST00000577708 61 ntBASIC16.53■□□□□ 0.24
RNF31Q96EP0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 MIR3687-1-201ENST00000614492 61 ntBASIC16.53■□□□□ 0.24
RNF31Q96EP0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF31Q96EP0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF31Q96EP0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 PRYP5-201ENST00000451909 266 ntBASIC16.52■□□□□ 0.24
RNF31Q96EP0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AC002347.1-201ENST00000569543 541 ntBASIC16.52■□□□□ 0.24
RNF31Q96EP0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RNF31Q96EP0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF31Q96EP0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF31Q96EP0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF31Q96EP0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RNF31Q96EP0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms