Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
RTP4Q96DX8 AL391256.1-201ENST00000443260 1855 ntBASIC17.42■□□□□ 0.38
RTP4Q96DX8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 KRT8P49-201ENST00000604166 1432 ntBASIC17.42■□□□□ 0.38
RTP4Q96DX8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 BX005266.1-201ENST00000473402 457 ntBASIC17.42■□□□□ 0.38
RTP4Q96DX8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.42■□□□□ 0.38
RTP4Q96DX8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTP4Q96DX8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 NKAPP1-205ENST00000585790 367 ntBASIC17.41■□□□□ 0.38
RTP4Q96DX8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTP4Q96DX8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTP4Q96DX8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
RTP4Q96DX8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 AC064862.7-201ENST00000604520 867 ntBASIC17.4■□□□□ 0.38
RTP4Q96DX8 AC013467.2-201ENST00000605472 835 ntBASIC17.4■□□□□ 0.38
RTP4Q96DX8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 AL589182.2-201ENST00000619332 1049 ntBASIC17.4■□□□□ 0.38
RTP4Q96DX8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTP4Q96DX8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms