Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.11■□□□□ 0.33
ULK4Q96C45 AC107918.4-202ENST00000641623 219 ntBASIC17.11■□□□□ 0.33
ULK4Q96C45 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.11■□□□□ 0.33
ULK4Q96C45 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ULK4Q96C45 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ULK4Q96C45 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ULK4Q96C45 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ULK4Q96C45 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 LINC02012-201ENST00000608206 1725 ntBASIC17.1■□□□□ 0.33
ULK4Q96C45 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 RPS2P28-201ENST00000314255 741 ntBASIC17.1■□□□□ 0.33
ULK4Q96C45 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.1■□□□□ 0.33
ULK4Q96C45 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.1■□□□□ 0.33
ULK4Q96C45 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 AC004706.3-202ENST00000621574 984 ntBASIC17.1■□□□□ 0.33
ULK4Q96C45 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 GPR89P-201ENST00000407924 1495 ntBASIC17.1■□□□□ 0.33
ULK4Q96C45 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ULK4Q96C45 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.1■□□□□ 0.33
ULK4Q96C45 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ULK4Q96C45 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ULK4Q96C45 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ULK4Q96C45 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.09■□□□□ 0.33
ULK4Q96C45 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 AC018712.1-201ENST00000455767 687 ntBASIC17.09■□□□□ 0.33
ULK4Q96C45 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 AP002469.2-201ENST00000531724 424 ntBASIC17.09■□□□□ 0.33
ULK4Q96C45 AL160237.2-201ENST00000556165 472 ntBASIC17.09■□□□□ 0.33
ULK4Q96C45 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.09■□□□□ 0.33
ULK4Q96C45 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.09■□□□□ 0.33
ULK4Q96C45 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.09■□□□□ 0.33
ULK4Q96C45 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ULK4Q96C45 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.09■□□□□ 0.33
ULK4Q96C45 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ULK4Q96C45 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ULK4Q96C45 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.08■□□□□ 0.33
ULK4Q96C45 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.08■□□□□ 0.33
ULK4Q96C45 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
ULK4Q96C45 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
ULK4Q96C45 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ULK4Q96C45 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ULK4Q96C45 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ULK4Q96C45 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.08■□□□□ 0.33
ULK4Q96C45 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ULK4Q96C45 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms