Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 NCF1C-201ENST00000438382 1427 ntBASIC16.02■□□□□ 0.15
NUP43Q8NFH3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 AC084018.2-201ENST00000613093 2607 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 FGFR3P6-201ENST00000457012 610 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 AL353135.1-201ENST00000606729 504 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 AC099398.1-201ENST00000567919 2776 ntBASIC16.01■□□□□ 0.15
NUP43Q8NFH3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUP43Q8NFH3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16■□□□□ 0.15
NUP43Q8NFH3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AL590787.1-201ENST00000568856 1315 ntBASIC16■□□□□ 0.15
NUP43Q8NFH3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
NUP43Q8NFH3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AGGF1P2-201ENST00000426656 2106 ntBASIC16■□□□□ 0.15
NUP43Q8NFH3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16■□□□□ 0.15
NUP43Q8NFH3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16■□□□□ 0.15
NUP43Q8NFH3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 KRT18P56-201ENST00000507275 550 ntBASIC16■□□□□ 0.15
NUP43Q8NFH3 SART3-203ENST00000546611 1184 ntBASIC16■□□□□ 0.15
NUP43Q8NFH3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16■□□□□ 0.15
NUP43Q8NFH3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16■□□□□ 0.15
NUP43Q8NFH3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16■□□□□ 0.15
NUP43Q8NFH3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16■□□□□ 0.15
NUP43Q8NFH3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NUP43Q8NFH3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUP43Q8NFH3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms