Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT1Q8NF37 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.27■□□□□ 0.35
LPCAT1Q8NF37 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 RPS15P9-201ENST00000494093 319 ntBASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 AC243591.1-201ENST00000452967 1364 ntBASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT1Q8NF37 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 PI4KAP1-204ENST00000612579 1703 ntBASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC116407.3-201ENST00000623905 1129 ntBASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC117500.6-201ENST00000624871 588 ntBASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AC005593.1-201ENST00000624894 515 ntBASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AL805961.1-202ENST00000641562 540 ntBASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT1Q8NF37 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LPCAT1Q8NF37 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms