Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 AC007274.1-201ENST00000439805 662 ntBASIC18.44■□□□□ 0.54
HERC6Q8IVU3 CRB3P1-201ENST00000449338 276 ntBASIC18.44■□□□□ 0.54
HERC6Q8IVU3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 AC084121.4-201ENST00000641598 221 ntBASIC18.44■□□□□ 0.54
HERC6Q8IVU3 AF228730.8-201ENST00000642140 221 ntBASIC18.44■□□□□ 0.54
HERC6Q8IVU3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HERC6Q8IVU3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AC097493.3-201ENST00000509725 367 ntBASIC18.43■□□□□ 0.54
HERC6Q8IVU3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AC069120.2-201ENST00000524091 540 ntBASIC18.43■□□□□ 0.54
HERC6Q8IVU3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 AL008721.1-201ENST00000609964 604 ntBASIC18.43■□□□□ 0.54
HERC6Q8IVU3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.43■□□□□ 0.54
HERC6Q8IVU3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC6Q8IVU3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 HMGA1P7-201ENST00000406908 502 ntBASIC18.42■□□□□ 0.54
HERC6Q8IVU3 MEIS3P1-201ENST00000495167 958 ntBASIC18.42■□□□□ 0.54
HERC6Q8IVU3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 AL358472.5-202ENST00000641448 1267 ntBASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms