Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 TERF1P1-201ENST00000311003 1181 ntBASIC18.61■□□□□ 0.57
CNGA4Q8IV77 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
CNGA4Q8IV77 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA4Q8IV77 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 AL592071.1-201ENST00000611956 408 ntBASIC18.6■□□□□ 0.57
CNGA4Q8IV77 AC005363.2-201ENST00000618631 242 ntBASIC18.6■□□□□ 0.57
CNGA4Q8IV77 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.6■□□□□ 0.57
CNGA4Q8IV77 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 AC092364.2-201ENST00000596710 2692 ntBASIC18.59■□□□□ 0.57
CNGA4Q8IV77 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 AC073912.3-201ENST00000624414 853 ntBASIC18.59■□□□□ 0.57
CNGA4Q8IV77 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.59■□□□□ 0.57
CNGA4Q8IV77 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNGA4Q8IV77 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms